Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
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Molecular interactions
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External references
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ID History
- Gene history

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Gene: bet-1 WBGene00022473

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Description

Bromodomain-containing protein bet-1 [Source:NCBI gene;Acc:172054]

Location

Chromosome I: 4,525,961-4,534,805 reverse strand.

WBcel235:BX284601.5

About this gene

This gene has 8 transcripts (splice variants), 65 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Y119C1B.8h.1	3010	857aa	Y119C1B.8h.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9MPT0	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	Y119C1B.8e.1	3000	854aa	Y119C1B.8e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9MQE5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	Y119C1B.8f.1	2998	855aa	Y119C1B.8f.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9MN31	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	Y119C1B.8c.1	2995	852aa	Y119C1B.8c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9MM65	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	Y119C1B.8a.1	2987	853aa	Y119C1B.8a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95Y80	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	Y119C1B.8b.1	2986	850aa	Y119C1B.8b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95Y80	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	Y119C1B.8d.1	2972	852aa	Y119C1B.8d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9MMD4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	Y119C1B.8g.1	2709	855aa	Y119C1B.8g.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9MMP9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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