Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by WormBase

.

Gene: ctn-1 WBGene00000832

.

Description

Alpha-CaTuliN (Catenin/vinculin related) [Source:UniProtKB/TrEMBL;Acc:Q8T3U1]

Location

Chromosome I: 2,606,754-2,617,360 forward strand.

WBcel235:BX284601.5

About this gene

This gene has 5 transcripts (splice variants), 136 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Y23H5A.5b.1	2653	759aa	Y23H5A.5b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2L012	NP_491009	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	Y23H5A.5d.1	2620	784aa	Y23H5A.5d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G8JYB2	NP_740813	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	Y23H5A.5a.1	2577	820aa	Y23H5A.5a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2L011	NP_491008	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	Y23H5A.5c.1	2103	642aa	Y23H5A.5c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T3U1	NP_740814
-	Y23H5A.5e	2540	No protein	-	A non-coding gene.ncRNA	-	-

.

Summary

.

.

Gene-based displays