Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: let-2 WBGene00002280

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Description

Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]

Location

Chromosome X: 16,380,597-16,389,371 reverse strand.

WBcel235:BX284606.5

About this gene

This gene has 4 transcripts (splice variants), 51 orthologues and 162 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F01G12.5b.1	5749	1759aa	F01G12.5b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P17140	NP_510663	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	F01G12.5a.1	5746	1758aa	F01G12.5a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P17140	NP_510664	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	F01G12.5b.2	5575	1759aa	F01G12.5b.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P17140	NP_510663	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	F01G12.5a.2	5572	1758aa	F01G12.5a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P17140	NP_510664	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays