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DB built by WormBase

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Gene: let-2 WBGene00002280

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Description

Collagen alpha-2(IV) chain [Source:NCBI gene;Acc:181708]

Location

Chromosome X: 16,380,597-16,389,340 reverse strand.

WBcel235:BX284606.5

About this gene

This gene has 2 transcripts (splice variants), 27 orthologues and 122 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F01G12.5b.1	5280	1759aa	F01G12.5b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P17140	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	F01G12.5a.1	5715	1758aa	F01G12.5a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P17140	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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