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DB built by WormBase

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Gene: nhr-88 WBGene00003678

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Description

Nuclear receptor domain-containing protein [Source:NCBI gene;Acc:173641]

Location

Chromosome II: 2,976,639-2,987,023 forward strand.

WBcel235:BX284602.5

About this gene

This gene has 3 transcripts (splice variants), 73 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	K08A2.5a.1	2970	593aa	K08A2.5a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2KZA1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	K08A2.5a.2	2888	593aa	K08A2.5a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2KZA1	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	K08A2.5c.1	793	235aa	K08A2.5c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KX66	-	-

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Summary

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