Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
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Supporting evidence
ID History
- Gene history

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DB built by WormBase

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Gene: ptp-1 WBGene00004213

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Description

Tyrosine-protein phosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:P28191]

Location

Chromosome III: 3,590,734-3,611,993 forward strand.

WBcel235:BX284603.4

About this gene

This gene has 9 transcripts (splice variants), 129 orthologues and 68 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	C48D5.2a.2	3546	1026aa	C48D5.2a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P28191	NP_497732	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	C48D5.2a.1	3524	1026aa	C48D5.2a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P28191	NP_497732	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	C48D5.2a.3	3371	1026aa	C48D5.2a.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P28191	NP_497732	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	C48D5.2b.2	2369	624aa	C48D5.2b.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P28191	NP_497733
-	C48D5.2b.1	2347	624aa	C48D5.2b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P28191	NP_497733
-	C48D5.2c.2	2202	589aa	C48D5.2c.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P28191	NP_741112
-	C48D5.2b.3	2194	624aa	C48D5.2b.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P28191	NP_497733
-	C48D5.2c.1	2180	589aa	C48D5.2c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P28191	NP_741112
-	C48D5.2c.3	2027	589aa	C48D5.2c.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P28191	NP_741112

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Summary

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Gene-based displays