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DB built by WormBase

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Gene: rpl-38 WBGene00004452

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Description

60S ribosomal protein L38 [Source:NCBI gene;Acc:180044]

Location

Chromosome V: 15,512,166-15,512,737 forward strand.

WBcel235:BX284605.5

About this gene

This gene has 4 transcripts (splice variants) and 32 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	C06B8.8.4	296	70aa	C06B8.8.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O17570	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	C06B8.8.1	287	70aa	C06B8.8.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O17570	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	C06B8.8.2	286	70aa	C06B8.8.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O17570	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	C06B8.8.3	285	70aa	C06B8.8.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O17570	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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