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DB built by WormBase

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Gene: trp-2 WBGene00006615

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Description

TRP (transient receptor potential) channel family [Source:NCBI gene;Acc:192056]

Location

Chromosome III: 991,881-1,001,931 forward strand.

WBcel235:BX284603.4

About this gene

This gene has 2 transcripts (splice variants), 135 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	R06B10.4b.1	2661	886aa	R06B10.4b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8I6Y9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	R06B10.4a.1	2509	816aa	R06B10.4a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EE02	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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