Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by WormBase

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Gene: sqst-1 WBGene00011737

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Description

SeQueSTosome related [Source:UniProtKB/TrEMBL;Acc:F1LIM5]

Location

Chromosome IV: 12,034,252-12,037,051 forward strand.

WBcel235:BX284604.4

About this gene

This gene has 3 transcripts (splice variants), 105 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	T12G3.1a.2	2443	693aa	T12G3.1a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q22436	NP_001255608	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	T12G3.1a.1	2413	693aa	T12G3.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q22436	NP_001255608	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	T12G3.1b.1	2377	621aa	T12G3.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LIM5	NP_001255609	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays