Summary
- Splice variants
- Transcript comparison
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- Orthologues
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Pan-taxonomic Compara
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- GO: Biological process
- GO: Molecular function
- GO: Cellular component
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Genetic Variation
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DB built by WormBase

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Gene: F09E10.7 WBGene00017297

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Description

DUF4440 domain-containing protein [Source:NCBI gene;Acc:180488]

Location

Chromosome X: 1,500,180-1,501,852 reverse strand.

WBcel235:BX284606.5

About this gene

This gene has 5 transcripts (splice variants), 1 orthologue and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F09E10.7a.2	652	109aa	F09E10.7a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2KZI2	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	F09E10.7a.1	616	109aa	F09E10.7a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2KZI2	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	F09E10.7a.3	567	109aa	F09E10.7a.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2KZI2	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	F09E10.7c.1	375	124aa	F09E10.7c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A078BPG0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	F09E10.7b	425	No protein	-	A non-coding gene.ncRNA	-	-	-

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Summary

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