Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
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DB built by WormBase

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Gene: tat-2 WBGene00019166

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Description

Phospholipid-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:U4PBV8]

Location

Chromosome IV: 4,827,853-4,846,893 reverse strand.

WBcel235:BX284604.4

About this gene

This gene has 6 transcripts (splice variants), 169 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	H06H21.10f.1	4273	1349aa	H06H21.10f.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PBV8	NP_001294447	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	H06H21.10a.1	4168	1314aa	H06H21.10a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9TXV2	NP_001023252	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	H06H21.10e.1	4155	1305aa	H06H21.10e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PBI0	NP_001294446	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	H06H21.10b.1	4050	1270aa	H06H21.10b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YXV5	NP_001023253	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	H06H21.10d.1	3900	1299aa	H06H21.10d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PEQ6	NP_001294445	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	H06H21.10c.1	3795	1264aa	H06H21.10c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PRL1	NP_001294444	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays