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DB built by WormBase

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Gene: herc-1 WBGene00021685

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Description

HECT domain-containing protein [Source:NCBI gene;Acc:171700]

Location

Chromosome I: 1,211,485-1,254,719 forward strand.

WBcel235:BX284601.5

About this gene

This gene has 6 transcripts (splice variants), 95 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Y48G8AL.1a.1	3290	1019aa	Y48G8AL.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9BL11	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	Y48G8AL.1a.2	3283	1019aa	Y48G8AL.1a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9BL11	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	Y48G8AL.1b.1	2067	688aa	Y48G8AL.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W6RY72	-	-
-	Y48G8AL.1c.1	1932	643aa	Y48G8AL.1c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W6RS03	-	-
-	Y48G8AL.1d.1	1515	504aa	Y48G8AL.1d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W6RTM2	-	-
-	Y48G8AL.1e.1	642	213aa	Y48G8AL.1e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W6SBJ0	-	-

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Summary

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