Homeobox protein ceh-38; One cut domain family member [Source:NCBI gene;Acc:174136]
Chromosome II: 6,951,998-6,955,408 forward strand.
This transcript has 8 exons and is annotated with 24 domains and features.
This transcript is a product of gene WBGene00000459 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| - | F22D3.1d.2 | 2865 | 646aa | F22D3.1d.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RCT5 | - | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| - | F22D3.1c.2 | 2778 | 617aa | F22D3.1c.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RBM7 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | F22D3.1k.1 | 2769 | 614aa | F22D3.1k.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RBM0 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | F22D3.1h.1 | 2739 | 635aa | F22D3.1h.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RC50 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | F22D3.1e.1 | 2724 | 644aa | F22D3.1e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RBJ2 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | F22D3.1b.1 | 2710 | 641aa | F22D3.1b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q19720 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | F22D3.1a.1 | 2709 | 632aa | F22D3.1a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q19720 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ceh-38-221 | F22D3.1d.1 | 2686 | 646aa | F22D3.1d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RCT5 | - | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ceh-38-217 | F22D3.1e.2 | 2686 | 644aa | F22D3.1e.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RBJ2 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ceh-38-215 | F22D3.1j.1 | 2683 | 643aa | F22D3.1j.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RBK3 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ceh-38-211 | F22D3.1b.2 | 2678 | 641aa | F22D3.1b.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q19720 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | F22D3.1p.1 | 2671 | 615aa | F22D3.1p.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RBK4 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ceh-38-222 | F22D3.1f.1 | 2660 | 637aa | F22D3.1f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RBJ5 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ceh-38-216 | F22D3.1h.2 | 2659 | 635aa | F22D3.1h.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RC50 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | F22D3.1a.2 | 2651 | 632aa | F22D3.1a.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q19720 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ceh-38-219 | F22D3.1m.1 | 2651 | 634aa | F22D3.1m.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RBN7 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ceh-38-220 | F22D3.1c.1 | 2599 | 617aa | F22D3.1c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RBM7 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ceh-38-212 | F22D3.1p.2 | 2599 | 615aa | F22D3.1p.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RBK4 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ceh-38-210 | F22D3.1k.2 | 2597 | 614aa | F22D3.1k.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RBM0 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ceh-38-214 | F22D3.1l.1 | 2590 | 612aa | F22D3.1l.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RBS0 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ceh-38-218 | F22D3.1i.1 | 2573 | 606aa | F22D3.1i.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RBR4 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ceh-38-213 | F22D3.1n.1 | 2569 | 605aa | F22D3.1n.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RCV1 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ceh-38-224 | F22D3.1o.1 | 2479 | 603aa | F22D3.1o.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RBK2 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ceh-38-223 | F22D3.1g.1 | 1827 | 608aa | F22D3.1g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RC48 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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