Transcript: F52E10.1a.1

Description

C2H2-type domain-containing protein; Zinc finger protein sdc-1 [Source:NCBI gene;Acc:181701]

Location

About this transcript

This transcript has 14 exons and is annotated with 12 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F52E10.1b.1	3856	1203aa	F52E10.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A486WU44	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	F52E10.1a.1	3702	1201aa	F52E10.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P24349	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 3,702 bps, Translation length: 1,201 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P24349

Version

F52E10.1a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase