Transcript: C09G5.8a.1

Description

Protein fantom [Source:NCBI gene;Acc:174654]

Location

About this transcript

This transcript has 17 exons and is annotated with 26 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	C09G5.8a.1	4096	1322aa	C09G5.8a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q09459	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	C09G5.8b.1	3279	1092aa	C09G5.8b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q09459	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	C09G5.8c	254	No protein	-	A non-coding gene.ncRNA	-	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 4,096 bps, Translation length: 1,322 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q09459

Version

C09G5.8a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase