Transcript: K04B12.3b.1

Description

Protein SMG8; Protein smg-8 [Source:NCBI gene;Acc:175103]

Location

About this transcript

This transcript has 9 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	K04B12.3a.1	2744	873aa	K04B12.3a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O62301	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	K04B12.3b.1	2709	871aa	K04B12.3b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PEH8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	K04B12.3c.1	1068	355aa	K04B12.3c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PBA4	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,709 bps, Translation length: 871 residues

Version

K04B12.3b.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase