Transcript: Y87G2A.3b.1

Description

Cysteine protease atg-4.1 [Source:NCBI gene;Acc:190777]

Location

About this transcript

This transcript has 7 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Y87G2A.3a.1	1576	454aa	Y87G2A.3a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K8ESC5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	Y87G2A.3b.1	1446	481aa	Y87G2A.3b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K8ESC5	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,446 bps, Translation length: 481 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: K8ESC5

Version

Y87G2A.3b.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase