Transcript: ZK1321.4b.1

Description

PDZ domain-containing protein [Source:NCBI gene;Acc:174538]

Location

About this transcript

This transcript has 10 exons and is annotated with 12 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	ZK1321.4a.1	1493	423aa	ZK1321.4a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EFP2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	ZK1321.4b.1	1290	429aa	ZK1321.4b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EDL9	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	ZK1321.4c.1	670	172aa	ZK1321.4c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A679L8N1	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,290 bps, Translation length: 429 residues

Version

ZK1321.4b.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase