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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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- Gene tree (Drosophilidae)
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- GO: Cellular component
- GO: Molecular function
- GO: Biological process
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DB built by FlyBase

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Gene: CG30089 FBgn0050089

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Gene Synonyms

Location

Primary_assembly 2R: 15,727,381-15,762,044 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 2 transcripts (splice variants) and 40 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG30089-RA	FBtr0087285	4696	1263aa	FBpp0086421	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZA45 Q8SX65 Q961E9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG30089-RB	FBtr0340007	3259	733aa	FBpp0309026	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LFI9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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