Transcript: FBtr0087285 CG30089-RA

Gene Synonyms

Location

About this transcript

This transcript has 7 exons, is annotated with 36 domains and features and maps to 45 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG30089-RA	FBtr0087285	4696	1263aa	FBpp0086421	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZA45 Q8SX65 Q961E9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG30089-RB	FBtr0340007	3259	733aa	FBpp0309026	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LFI9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 4,696 bps, Translation length: 1,263 residues

Version

FBtr0087285

Type

Protein coding

Annotation Method

RefSeq gene models from NCBI RefSeq using the GFF3 files available from the NCBI FTP site.