Summary
- Splice variants
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: cact FBgn0000250

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Description

cactus

Gene Synonyms

Location

Primary_assembly 2L: 16,313,036-16,326,207 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 5 transcripts (splice variants), 69 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
cact-RD	FBtr0080847	2178	500aa	FBpp0089296	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PD95 Q03017	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
cact-RC	FBtr0080846	2356	482aa	FBpp0080404	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
cact-RB	FBtr0080845	2005	500aa	FBpp0080403	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C1C5B1 M9PD95 Q03017	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
cact-RE	FBtr0337081	1999	500aa	FBpp0308004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PD95 Q03017	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
cact-RA	FBtr0080844	1893	500aa	FBpp0080402	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PD95 Q03017	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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