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DB built by FlyBase

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Gene: cad FBgn0000251

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Description

caudal

Gene Synonyms

Location

Primary_assembly 2L: 20,770,731-20,783,135 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 3 transcripts (splice variants) and 37 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
cad-RC	FBtr0335152	2570	445aa	FBpp0307151	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDI3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
cad-RA	FBtr0081412	2516	427aa	FBpp0080942	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P09085	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
cad-RB	FBtr0081413	2353	427aa	FBpp0089336	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P09085	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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