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DB built by FlyBase

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Gene: gro FBgn0001139

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Description

groucho

Gene Synonyms

Location

Primary_assembly 3R: 26,041,736-26,049,911 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 10 transcripts (splice variants) and 95 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
gro-RE	FBtr0084966	3002	730aa	FBpp0089115	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P16371	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
gro-RJ	FBtr0339900	3975	717aa	FBpp0308932	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHP1 F0JAN3	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
gro-RH	FBtr0305047	3951	709aa	FBpp0293584	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6L6	-	-
gro-RI	FBtr0337057	3918	698aa	FBpp0307986	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KH09	-	-
gro-RG	FBtr0302952	2996	728aa	FBpp0292078	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JDF1	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
gro-RA	FBtr0084963	2988	719aa	FBpp0084337	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JD02	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
gro-RF	FBtr0302951	2975	719aa	FBpp0292077	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JD02	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
gro-RB	FBtr0084962	2969	719aa	FBpp0084336	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JD02	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
gro-RD	FBtr0084964	2908	719aa	FBpp0084338	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JD02	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
gro-RC	FBtr0084965	2887	719aa	FBpp0084339	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JD02	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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