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DB built by FlyBase

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Gene: Idh FBgn0001248

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Description

Isocitrate dehydrogenase

Gene Synonyms

Location

Primary_assembly 3L: 8,356,404-8,360,906 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 9 transcripts (splice variants) and 60 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Idh-RK	FBtr0333058	1974	479aa	FBpp0305272	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0E0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
Idh-RB	FBtr0076669	2026	450aa	FBpp0076392	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VSI6	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Idh-RC	FBtr0076670	1944	469aa	FBpp0076393	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C8VV61 Q7KUB1	-	-
Idh-RJ	FBtr0114549	1899	450aa	FBpp0113041	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VSI6	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Idh-RG	FBtr0076673	1809	450aa	FBpp0076396	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VSI6	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Idh-RI	FBtr0114548	1776	450aa	FBpp0113040	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VSI6	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Idh-RF	FBtr0076668	1646	416aa	FBpp0076391	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KUB0	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Idh-RD	FBtr0076671	1642	437aa	FBpp0076394	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IQA7	-	-
Idh-RA	FBtr0076667	1616	416aa	FBpp0076390	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KUB0	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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