Summary
- Splice variants
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DB built by FlyBase

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Gene: Treh FBgn0003748

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Description

Trehalase

Gene Synonyms

Location

Primary_assembly 2R: 21,074,018-21,088,945 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 7 transcripts (splice variants), 88 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Treh-RC	FBtr0071539	2928	596aa	FBpp0071468	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A165Q6N5 A5XCQ1 A5XCQ4 A5XCQ7 A5XCQ9 Q9W2M2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Treh-RE	FBtr0071535	3354	560aa	FBpp0071464	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4UZR3	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Treh-RD	FBtr0071536	2992	560aa	FBpp0071465	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4UZR3	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Treh-RG	FBtr0332423	2991	560aa	FBpp0304696	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4UZR3	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Treh-RF	FBtr0071540	2822	596aa	FBpp0071469	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5XCQ1 Q9W2M2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Treh-RA	FBtr0071537	2758	560aa	FBpp0071466	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4UZR3	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Treh-RB	FBtr0071538	2662	515aa	FBpp0071467	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

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Summary

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