Summary
- Splice variants
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DB built by FlyBase

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Gene: fra FBgn0011592

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Description

frazzled

Gene Synonyms

Location

Primary_assembly 2R: 12,529,053-12,564,184 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 3 transcripts (splice variants), 312 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
fra-RA	FBtr0087822	6320	1526aa	FBpp0086935	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z920 B7FNQ2 C3KGI5 Q1LZ45 Q94538	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
fra-RC	FBtr0339649	6293	1517aa	FBpp0308711	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LEX6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
fra-RB	FBtr0087821	5867	1375aa	FBpp0086934	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z921 Q94537	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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