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DB built by FlyBase

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Gene: Mef2 FBgn0011656

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Description

Myocyte enhancer factor 2

Gene Synonyms

Location

Primary_assembly 2R: 9,913,496-9,958,858 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 11 transcripts (splice variants) and 43 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Mef2-RH	FBtr0330708	3908	606aa	FBpp0303551	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFI1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
Mef2-RF	FBtr0088447	6040	501aa	FBpp0089303	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mef2-RC	FBtr0088445	5854	515aa	FBpp0087531	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9ZYP5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mef2-RG	FBtr0330707	5240	511aa	FBpp0303550	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KEP4	-	-
Mef2-RD	FBtr0088443	3690	540aa	FBpp0087529	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P40791	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mef2-RJ	FBtr0479642	3289	534aa	FBpp0424319	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6M3QA49	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mef2-RL	FBtr0479644	3253	522aa	FBpp0424321	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6M3Q823	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Mef2-RA	FBtr0088444	3235	516aa	FBpp0087530	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mef2-RB	FBtr0088446	3214	509aa	FBpp0087532	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mef2-RK	FBtr0479643	3133	482aa	FBpp0424320	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6M3Q705	-	-
Mef2-RI	FBtr0479641	3115	476aa	FBpp0424318	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6M3Q797	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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