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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: Syx5 FBgn0011708

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Description

Syntaxin 5

Gene Synonyms

Location

Primary_assembly 2L: 16,307,346-16,309,274 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 2 transcripts (splice variants), 75 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Syx5-RA	FBtr0080832	1861	467aa	FBpp0080390	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V0S1 Q24509	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Syx5-RB	FBtr0080831	1768	467aa	FBpp0080389	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V0S1 Q24509	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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