Summary
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DB built by FlyBase

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Gene: cnn FBgn0013765

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Description

centrosomin

Gene Synonyms

Location

Primary_assembly 2R: 13,439,314-13,450,475 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 12 transcripts (splice variants) and 2 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
cnn-RL	FBtr0309891	5012	1378aa	FBpp0301625	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K863	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
cnn-RJ	FBtr0309889	4830	1320aa	FBpp0301623	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P54623	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
cnn-RE	FBtr0100656	4651	1130aa	FBpp0100117	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z9D3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
cnn-RB	FBtr0087704	4621	1120aa	FBpp0086823	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K7N9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
cnn-RM	FBtr0309892	4399	1120aa	FBpp0301626	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K7N9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
cnn-RA	FBtr0087703	4322	1148aa	FBpp0086822	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
cnn-RN	FBtr0309893	4310	1120aa	FBpp0301627	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K7N9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
cnn-RD	FBtr0100654	4140	1090aa	FBpp0100116	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z9D4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
cnn-RK	FBtr0309890	2006	520aa	FBpp0301624	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K773	-	-
cnn-RH	FBtr0306635	1824	462aa	FBpp0297590	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K705	-	-
cnn-RI	FBtr0309888	1769	500aa	FBpp0301622	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6Z9	-	-
cnn-RG	FBtr0301395	1709	480aa	FBpp0290609	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JH56	-	-

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Summary

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