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DB built by FlyBase

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Gene: NetB FBgn0015774

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Description

Netrin-B

Gene Synonyms

Location

Primary_assembly X: 14,686,038-14,749,376 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 7 transcripts (splice variants), 79 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
NetB-RD	FBtr0302018	7926	793aa	FBpp0291228	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJP7 Q24568	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
NetB-RA	FBtr0073940	6505	793aa	FBpp0073757	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJP7 Q24568	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
NetB-RE	FBtr0304874	6418	793aa	FBpp0293414	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJP7 Q24568	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
NetB-RC	FBtr0302017	6415	793aa	FBpp0291227	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJP7 Q24568	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
NetB-RB	FBtr0302016	6412	793aa	FBpp0291226	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJP7 Q24568	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
NetB-RG	FBtr0331596	6391	785aa	FBpp0303986	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PH47 Q95SP5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
NetB-RF	FBtr0304875	6355	793aa	FBpp0293415	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJP7 Q24568	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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