Summary
- Splice variants
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DB built by FlyBase

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Gene: apt FBgn0015903

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Description

apontic

Gene Synonyms

Location

Primary_assembly 2R: 23,564,891-23,599,526 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 6 transcripts (splice variants), 3 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
apt-RF	FBtr0332926	2655	499aa	FBpp0305146	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KGD0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
apt-RA	FBtr0072070	2827	483aa	FBpp0071979	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O16114 O44203 O61602	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
apt-RC	FBtr0072069	2783	483aa	FBpp0071978	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O61602	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
apt-RE	FBtr0072068	2775	469aa	FBpp0071977	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MLR4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
apt-RD	FBtr0072067	2762	483aa	FBpp0071976	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O61602	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
apt-RB	FBtr0072066	2608	489aa	FBpp0071975	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3DMD0 O17430 Q9W1M6	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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