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DB built by FlyBase

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Gene: sdk FBgn0021764

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Description

sidekick

Gene Synonyms

Location

Primary_assembly X: 686,834-749,496 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 9 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
sdk-RG	FBtr0340195	9031	2265aa	FBpp0309170	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JHT7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
sdk-RE	FBtr0302259	9406	2224aa	FBpp0291468	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJC3 O97394	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
sdk-RC	FBtr0070131	8984	2232aa	FBpp0070126	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
sdk-RD	FBtr0070130	8960	2224aa	FBpp0070125	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJC3 O97394	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
sdk-RB	FBtr0070132	8908	2224aa	FBpp0070127	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJC3 O97394	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
sdk-RH	FBtr0340196	8896	2220aa	FBpp0309171	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JDB3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
sdk-RA	FBtr0070133	8843	2224aa	FBpp0070128	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJC3 O97394	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
sdk-RF	FBtr0302260	8774	2224aa	FBpp0291469	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C8VV85 E1JJC3 O97394 Q058U2 Q7KN65	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
sdk-RI	FBtr0340197	8740	2168aa	FBpp0309172	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JDR3	-	-

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Summary

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