Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
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- Orthologues
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Pan-taxonomic Compara
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- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
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DB built by FlyBase

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Gene: Dbp80 FBgn0024804

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Description

Dead box protein 80

Gene Synonyms

Location

Primary_assembly 3L: 27,279,316-27,422,159 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 5 transcripts (splice variants), 94 orthologues and 30 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Dbp80-RE	FBtr0331781	1505	481aa	FBpp0304166	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G7H860 L7EEU0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Dbp80-RG	FBtr0331783	1564	354aa	FBpp0304168	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L7EFC0	-	-
Dbp80-RB	FBtr0113715	1459	447aa	FBpp0112438	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O61305 Q5LK13 Q8SYQ3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Dbp80-RF	FBtr0331782	1458	316aa	FBpp0304167	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L7EGI4	-	-
Dbp80-RD	FBtr0331780	1203	279aa	FBpp0304165	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LK12	-	-

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Summary

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