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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: Optix FBgn0025360

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Description

Optix

Gene Synonyms

Location

Primary_assembly 2R: 8,031,283-8,042,529 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 3 transcripts (splice variants), 16 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Optix-RC	FBtr0329885	2668	492aa	FBpp0302920	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KEE9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
Optix-RA	FBtr0088865	2358	487aa	FBpp0087941	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95RW8	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Optix-RB	FBtr0088866	1470	259aa	FBpp0087942	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

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Summary

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