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DB built by FlyBase

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Gene: Eph FBgn0025936

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Description

Eph receptor tyrosine kinase

Gene Synonyms

Location

Primary_assembly 4: 610,684-622,470 forward strand.

BDGP6.46:AE014135.4

About this gene

This gene has 6 transcripts (splice variants), 113 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Eph-RC	FBtr0089084	4190	1096aa	FBpp0088153	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MT37 Q9V4E5 Q9XZL6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Eph-RE	FBtr0089086	5630	1080aa	FBpp0088155	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0KIF4 Q9Y1J0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Eph-RA	FBtr0089082	4142	1080aa	FBpp0088151	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0KIF4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Eph-RB	FBtr0089083	4068	1047aa	FBpp0088152	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IMC2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Eph-RF	FBtr0301285	3854	1005aa	FBpp0290500	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D1YSF9 Q5BIC7	-	-
Eph-RD	FBtr0089085	3691	1080aa	FBpp0088154	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O96435 Q59DQ4 Q6SAV0	-	-

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Summary

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