▼

Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: VhaSFD FBgn0027779

.

Description

Vacuolar H[+]-ATPase SFD subunit

Gene Synonyms

Location

Primary_assembly 2L: 16,722,883-16,727,826 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 4 transcripts (splice variants) and 73 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
VhaSFD-RB	FBtr0080941	2376	542aa	FBpp0080495	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
VhaSFD-RE	FBtr0335143	2503	468aa	FBpp0307142	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDK5 Q9V3J1	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
VhaSFD-RD	FBtr0080942	2247	441aa	FBpp0080496	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
VhaSFD-RA	FBtr0080940	2154	468aa	FBpp0080494	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDK5 Q9V3J1	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.