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DB built by FlyBase

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Gene: Drep2 FBgn0028408

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Description

DNA fragmentation factor-related protein 2

Gene Synonyms

Location

Primary_assembly 2R: 9,291,856-9,302,821 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 4 transcripts (splice variants), 53 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Drep2-RB	FBtr0112930	5203	549aa	FBpp0111843	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DY77	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Drep2-RC	FBtr0304798	5839	482aa	FBpp0293338	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K304	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Drep2-RA	FBtr0088597	5229	482aa	FBpp0087678	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K304 Q95S67 Q9U787	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Drep2-RD	FBtr0332998	1827	497aa	FBpp0305213	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFF6 F3YD50	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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