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DB built by FlyBase

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Gene: stol FBgn0028863

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Description

stolid

Gene Synonyms

Location

Primary_assembly 2L: 15,644,183-15,718,272 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 8 transcripts (splice variants), 51 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
stol-RH	FBtr0344773	6010	1271aa	FBpp0311102	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J9Z3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
stol-RL	FBtr0344777	8130	1260aa	FBpp0311106	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DZ06	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
stol-RM	FBtr0344778	8130	1260aa	FBpp0311107	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DZ06	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
stol-RK	FBtr0344776	6057	1260aa	FBpp0311105	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DZ06	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
stol-RJ	FBtr0344775	6057	1260aa	FBpp0311104	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DZ06 D0IQF5	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
stol-RI	FBtr0344774	6010	1271aa	FBpp0311103	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J9Z3	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
stol-RO	FBtr0344780	5404	1260aa	FBpp0311109	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DZ06	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
stol-RN	FBtr0344779	5404	1260aa	FBpp0311108	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DZ06	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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