Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: nAChRalpha5 FBgn0028875

.

Description

nicotinic Acetylcholine Receptor alpha5

Gene Synonyms

Location

Primary_assembly 2L: 14,040,170-14,094,401 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 4 transcripts (splice variants), 389 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
nAChRalpha5-RI	FBtr0474155	7755	837aa	FBpp0423154	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A499GGQ3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
nAChRalpha5-RD	FBtr0300594	9129	808aa	FBpp0289821	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KT97	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
nAChRalpha5-RH	FBtr0309867	7755	808aa	FBpp0301601	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KT97 Q8T5F5 Q8T7V5	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
nAChRalpha5-RB	FBtr0080594	4396	808aa	FBpp0089367	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KT97	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.