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Summary
- Splice variants
- Transcript comparison
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DB built by FlyBase

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Gene: deltaCOP FBgn0028969

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Description

Coat Protein (coatomer) delta

Gene Synonyms

Location

Primary_assembly X: 1,859,141-1,861,790 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 2 transcripts (splice variants) and 80 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
deltaCOP-RA	FBtr0070371	2170	532aa	FBpp0070355	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W555	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
deltaCOP-RB	FBtr0301926	2167	531aa	FBpp0291138	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F0JAK8 Q7K7G0 Q9U8A9	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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