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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
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DB built by FlyBase

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Gene: Tsp5D FBgn0029837

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Description

Tetraspanin 5D

Gene Synonyms

Location

Primary_assembly X: 6,069,131-6,074,857 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 3 transcripts (splice variants), 64 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Tsp5D-RC	FBtr0331169	1827	287aa	FBpp0303596	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDV2 Q8MS10	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
Tsp5D-RA	FBtr0070888	1972	283aa	FBpp0070853	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W441	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Tsp5D-RB	FBtr0114466	1827	283aa	FBpp0112958	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W441	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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