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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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DB built by FlyBase

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Gene: pira FBgn0030420

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Description

pirate

Gene Synonyms

Location

Primary_assembly X: 12,760,642-12,763,611 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 2 transcripts (splice variants) and 62 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
pira-RB	FBtr0346120	2970	681aa	FBpp0311949	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9YGV2 A9YGV4 A9YGV6 A9YGW2 F6J223 F6J228 F6J230 F6J231 Q29QU9 Q8T462 Q9VYJ5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
pira-RA	FBtr0073704	2734	681aa	FBpp0073537	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VYJ5	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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