Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
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Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
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Regulation
External references
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DB built by FlyBase

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Gene: CG9095 FBgn0030617

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Gene Synonyms

Location

Primary_assembly X: 15,139,937-15,163,225 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 4 transcripts (splice variants), 59 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG9095-RB	FBtr0112984	5349	1141aa	FBpp0111897	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JUX3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG9095-RD	FBtr0340410	4809	961aa	FBpp0309356	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6J6Z5 X2JBY1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG9095-RA	FBtr0074026	4791	955aa	FBpp0073843	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6J6Z3 Q9VXX7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG9095-RC	FBtr0330402	4791	968aa	FBpp0303428	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6J6Y3 F6J6Y6 F6J707 F6J718 F6J722 M9PHT4	-	-

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Summary

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