Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
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Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG6299 FBgn0030641

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Gene Synonyms

Location

Primary_assembly X: 15,462,722-15,466,812 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 5 transcripts (splice variants), 46 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG6299-RB	FBtr0074032	2551	205aa	FBpp0073849	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VXV1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG6299-RA	FBtr0074033	1013	205aa	FBpp0073850	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VXV1	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG6299-RD	FBtr0343984	1003	205aa	FBpp0310436	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VXV1	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG6299-RC	FBtr0343983	987	205aa	FBpp0310435	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VXV1	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG6299-RE	FBtr0345130	838	205aa	FBpp0311351	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VXV1	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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