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DB built by FlyBase

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Gene: wcy FBgn0030812

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Description

wacky

Gene Synonyms

Location

Primary_assembly X: 17,068,717-17,077,897 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 6 transcripts (splice variants) and 51 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
wcy-RF	FBtr0310525	4624	876aa	FBpp0302662	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHE3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
wcy-RD	FBtr0304840	4773	834aa	FBpp0293380	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VX88	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
wcy-RA	FBtr0074412	4532	834aa	FBpp0074186	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VX88	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
wcy-RG	FBtr0330596	4532	860aa	FBpp0303447	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHX3	-	-
wcy-RE	FBtr0310524	4511	838aa	FBpp0302661	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PEY4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
wcy-RC	FBtr0304839	4466	832aa	FBpp0293379	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R9PY73	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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