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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
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- Gene history

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DB built by FlyBase

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Gene: CG3544 FBgn0031279

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Gene Synonyms

Location

Primary_assembly 2L: 784,336-788,776 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 2 transcripts (splice variants), 66 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG3544-RB	FBtr0331652	4359	572aa	FBpp0304042	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VPT2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG3544-RA	FBtr0078007	1823	572aa	FBpp0077672	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VPT2	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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