Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
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- Gene history

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DB built by FlyBase

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Gene: CG11149 FBgn0031732

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Gene Synonyms

Location

Primary_assembly 2L: 5,718,121-5,720,899 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 5 transcripts (splice variants), 63 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG11149-RA	FBtr0079169	1995	493aa	FBpp0078800	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SYJ5 Q9VMN1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CG11149-RE	FBtr0332556	1999	475aa	FBpp0304814	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0IGW5	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG11149-RB	FBtr0079168	1952	493aa	FBpp0078799	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VMN1	-	-
CG11149-RC	FBtr0300695	1941	475aa	FBpp0289919	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0IGW5	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG11149-RD	FBtr0300696	1898	475aa	FBpp0289920	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0IGW5	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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