Summary
- Splice variants
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DB built by FlyBase

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Gene: CG17378 FBgn0031858

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Gene Synonyms

Location

Primary_assembly 2L: 6,774,041-6,778,444 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 3 transcripts (splice variants) and 49 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG17378-RA	FBtr0079336	3135	610aa	FBpp0078965	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VM87	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG17378-RB	FBtr0079337	2238	561aa	FBpp0078966	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPJ2 Q8T8V1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG17378-RC	FBtr0332335	1935	561aa	FBpp0304612	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPJ2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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