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DB built by FlyBase

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Gene: uif FBgn0031879

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Description

uninflatable

Gene Synonyms

Location

Primary_assembly 2L: 6,972,828-7,010,359 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 6 transcripts (splice variants) and 30 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
uif-RF	FBtr0307074	11780	3589aa	FBpp0297917	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHA6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
uif-RC	FBtr0302162	11753	3589aa	FBpp0291372	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHA6	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
uif-RE	FBtr0307073	11750	3589aa	FBpp0297916	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHA6	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
uif-RB	FBtr0290119	11654	3557aa	FBpp0288558	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VEG4 C0PVB0 Q9NGV4 Q9VM55	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
uif-RD	FBtr0307072	11533	3589aa	FBpp0297915	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHA6	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
uif-RG	FBtr0339664	11437	3557aa	FBpp0308723	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VM55	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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