Summary
- Splice variants
- Transcript comparison
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Sequence
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Literature
Metazoan Compara
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- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG13384 FBgn0032036

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Location

Primary_assembly 2L: 8,384,455-8,388,804 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 11 transcripts (splice variants), 114 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG13384-RC	FBtr0079655	2430	504aa	FBpp0079271	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E8NH21 Q9VLM3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CG13384-RD	FBtr0079654	2693	483aa	FBpp0079270	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KTI1	-	-
CG13384-RE	FBtr0079656	2635	483aa	FBpp0079272	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KTI1	-	-
CG13384-RH	FBtr0303467	2560	483aa	FBpp0292519	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KTI1	-	-
CG13384-RJ	FBtr0303469	2543	486aa	FBpp0292521	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VLM4	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
CG13384-RF	FBtr0079658	2534	483aa	FBpp0079274	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KTI1	-	-
CG13384-RG	FBtr0079653	2531	482aa	FBpp0079269	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MSR2	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
CG13384-RI	FBtr0303468	2510	483aa	FBpp0292520	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KTI1	-	-
CG13384-RK	FBtr0303470	2484	482aa	FBpp0292522	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MSR2	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
CG13384-RB	FBtr0079657	2238	486aa	FBpp0079273	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VLM4	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
CG13384-RL	FBtr0303471	2226	482aa	FBpp0292523	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MSR2	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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