Summary
- Splice variants
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DB built by FlyBase

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Gene: loqs FBgn0032515

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Description

loquacious

Gene Synonyms

Location

Primary_assembly 2L: 13,382,652-13,385,671 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 6 transcripts (splice variants), 71 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
loqs-RB	FBtr0080498	2017	465aa	FBpp0080076	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VJY9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
loqs-RC	FBtr0100220	2147	383aa	FBpp0099590	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4TZM6	-	-
loqs-RF	FBtr0342633	2014	464aa	FBpp0309562	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q27IS6 Q27IS7 X2J5X6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
loqs-RA	FBtr0080497	1879	419aa	FBpp0080075	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IP72	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
loqs-RE	FBtr0342632	1876	418aa	FBpp0309561	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JAB1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
loqs-RD	FBtr0303269	1334	359aa	FBpp0292361	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRT5 Q27IS6 Q27IS7	-	-

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Summary

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